Terkko Navigator / RNA

The limits of human microRNA annotation have been met [PERSPECTIVE]

FISH-quant v2: a scalable and modular tool for smFISH image analysis [BIOINFORMATICS]

Plasticity and conditional essentiality of modification enzymes for domain V of Escherichia coli 23S ribosomal RNA [ARTICLE]

The interplay between translational efficiency, poly(A) tails, microRNAs, and neuronal activation [ARTICLE]

Thermodynamic characterization of naturally occurring RNA pentaloops [ARTICLE]

Evolutionary divergence of Firre localization and expression [ARTICLE]

Reversing the miRNA -5p/-3p stoichiometry reveals physiological roles and targets of miR-140 miRNAs [ARTICLE]

Ligands with polyfluorophenyl moieties promote a local structural rearrangement in the Spinach2 and Broccoli aptamers that increases ligand affinities [ARTICLE]

ZFC3H1 and U1-70K promote the nuclear retention of mRNAs with 5' splice site motifs within nuclear speckles [ARTICLE]

Mito-FUNCAT-FACS reveals cellular heterogeneity in mitochondrial translation [METHOD]

Global SLAM-seq for accurate mRNA decay determination and identification of NMD targets [METHOD]

The universally conserved nucleotides of the small subunit ribosomal RNAs [BIOINFORMATICS]

Tailer: a pipeline for sequencing-based analysis of nonpolyadenylated RNA 3' end processing [BIOINFORMATICS]

Yeast Dxo1 is required for 25S rRNA maturation and acts as a transcriptome-wide distributive exonuclease [REPORT]

Precise gene models using long-read sequencing reveal a unique poly(A) signal in Giardia lamblia [ARTICLE]

Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs [ARTICLE]

Identification and mapping of post-transcriptional modifications on the HIV-1 antisense transcript Ast in human cells [ARTICLE]

The Pet127 protein is a mitochondrial 5'-to-3' exoribonuclease from the PD-(D/E)XK superfamily involved in RNA maturation and intron degradation in yeasts [ARTICLE]

Correlated sequence signatures are present within the genomic 5'UTR RNA and NSP1 protein in coronaviruses [ARTICLE]

Vault RNA1-1 riboregulates the autophagic function of p62 by binding to lysine 7 and arginine 21, both of which are critical for p62 oligomerization [ARTICLE]

Oppositional poly(A) tail length regulation by FMRP and CPEB1 [ARTICLE]

The key features of SARS-CoV-2 leader and NSP1 required for viral escape of NSP1-mediated repression [ARTICLE]

Cytoplasmic RNA sensors and their interplay with RNA-binding partners in innate antiviral response: theme and variations [REVIEW]

Widespread genetic heterogeneity of human ribosomal RNA genes [BIOINFORMATICS]

Contribution of domain structure to the function of the yeast DEDD family exoribonuclease and RNase T functional homolog, Rex1 [REPORT]

Nuclear magnetic resonance reveals a two hairpin equilibrium near the 3'-splice site of influenza A segment 7 mRNA that can be shifted by oligonucleotides [ARTICLE]

Alternative splicing regulation of membrane trafficking genes during myogenesis [ARTICLE]

T-hairpin structure found in the RNA element involved in piRNA biogenesis [ARTICLE]

Synthetic riboswitches for the analysis of tRNA processing by eukaryotic RNase P enzymes [ARTICLE]

The modifying enzyme Tsr3 establishes the hierarchy of Rio kinase binding in 40S ribosome assembly [ARTICLE]

A model for DHX15 mediated disassembly of A-complex spliceosomes [ARTICLE]

VfoldMCPX: predicting multistrand RNA complexes [ARTICLE]

The PIWI/piRNA response is relaxed in a rodent that lacks mobilizing transposable elements [ARTICLE]

2021 Recipients of the RNA Journal Prize [EDITORIAL]

sgDI-tector: defective interfering viral genome bioinformatics for detection of coronavirus subgenomic RNAs [BIOINFORMATICS]

The landscape of translational stall sites in bacteria revealed by monosome and disome profiling [REPORT]

Splicing efficiency of minor introns in a mouse model of SMA predominantly depends on their branchpoint sequence and can involve the contribution of major spliceosome components [ARTICLE]

Frameshifting at collided ribosomes is modulated by elongation factor eEF3 and by integrated stress response regulators Gcn1 and Gcn20 [ARTICLE]

Nonstandard RNA/RNA interactions likely enhance folding and stability of segmented ribosomes [ARTICLE]

RNA uridyl transferases TUT4/7 differentially regulate miRNA variants depending on the cancer cell type [ARTICLE]

Release of the ribosome biogenesis factor Bud23 from small subunit precursors in yeast [ARTICLE]

Development of an RNA-protein crosslinker to capture protein interactions with diverse RNA structures in cells [METHOD]

Nanopore sequencing of RNA and cDNA molecules in Escherichia coli [METHOD]

A versatile tRNA modification-sensitive northern blot method with enhanced performance [METHOD]

Quantitative intracellular retention of delivered RNAs through optimized cell fixation and immunostaining [METHOD]

Introducing the new Meet the First Author(s) feature in RNA [EDITORIAL]

RNALigands: a database and web server for RNA-ligand interactions [BIOINFORMATICS]

Ribosome profiling reveals novel regulation of C9ORF72 GGGGCC repeat-containing RNA translation [REPORT]

Transcription and splicing dynamics during early Drosophila development [ARTICLE]

Identification of high-confidence human poly(A) RNA isoform scaffolds using nanopore sequencing [ARTICLE]