Terkko Navigator / Genomics

Locate-R: Subcellular localization of long non-coding RNAs using nucleotide compositions

Identification of potential candidate genes involved in the sex determination cascade in an aquatic firefly, Sclerotia aquatilis (Coleoptera, Lampyridae)

LncRNA HSPC324 plays role in lung development and tumorigenesis

MicroRNA profiling in the bursae of Marek's disease virus-infected resistant and susceptible chicken lines

Complete genome sequence of Paracoccus sp. strain AK26: Insights into multipartite genome architecture and methylotropy

Genome-wide analysis of the role of DNA methylation in inbreeding depression of reproduction in Langshan chicken

Aneuploid IMR90 cells induced by depletion of pRB, DNMT1 and MAD2 show a common gene expression signature

Comparative analysis of the P-type ATPase gene family in seven Rosaceae species and an expression analysis in pear (Pyrus bretschneideri Rehd.)

Correlation between polymorphisms in IGF2/H19 gene locus and epithelial ovarian cancer risk in Chinese population

The complete mitochondrial genome of Calappa bilineata: The first representative from the family Calappidae and its phylogenetic position within Brachyura

Investigating the gene expression profiles of cells in seven embryonic stages with machine learning algorithms

Genome-wide identification, characterization and expression analysis of the TLP gene family in melon (Cucumis melo L.)

The transcriptomes from two adipocyte progenitor cell types provide insight into the differential functions of MSTN

Neofunctionalization of the UCP1 mediated the non-shivering thermogenesis in the evolution of small-sized placental mammals

Comparison among three methods for obtaining chloroplast genome sequences from the conifer Pinus massoniana

Relationship between common eNOS gene polymorphisms and predisposition to coronary artery disease: Evidence from a meta-analysis of 155 published association studies

Systemic analysis of the expression and prognostic significance of PAKs in breast cancer

Using extreme gradient boosting to identify origin of replication in Saccharomyces cerevisiae via hybrid features

The relationship between the minor allele content and Alzheimer's disease

Function and characterization of the promoter region of perilipin 1 (PLIN1): Roles of E2F1, PLAG1, C/EBPβ, and SMAD3 in bovine adipocytes

The genomic context of retrocopies increases their chance of functional relevancy in mammals

Single-cell alternative splicing analysis reveals dominance of single transcript variant

Whole genome sequence of an edible and medicinal mushroom, Hericium erinaceus (Basidiomycota, Fungi)

Genomic diversity and selection sweeps identified in Indian swamp buffaloes revealsits uniqueness with riverine buffaloes

Establishment of an eHAP1 human haploid cell line hybrid reference genome assembled from short and long reads

Predicting subcellular localization of proteins using protein-protein interaction data

SRNAome and transcriptome analysis provide insight into strawberry fruit ripening

Evolutionary dynamics in chloroplast genome of subfamily Aroideae (Araceae)

Identification and evolutionary analysis of polycistronic miRNA clusters in domesticated and wild wheat

Isolation and characterization of hypoxia inducible heme oxygenase 1 (HMOX1) gene in Labeo rohita

Analysis of candidate genes expression associated with defense responses to root and collar rot disease caused by Phytophthora capsici in peppers Capsicum annuum

LncRNAs related key pathways and genes in ischemic stroke by weighted gene co-expression network analysis (WGCNA)

Genome-wide identification and expression analysis of flowering-related genes reveal putative floral induction and differentiation mechanisms in tea plant (Camellia sinensis)

Effect of ELOVL6 on the lipid metabolism of bovine adipocytes

Analysis of the antennal transcriptome and odorant-binding protein expression profiles of the parasitoid wasp Encarsia formosa

Enhancer jungles establish robust tissue-specific regulatory control in the human genome

Collagen-like sequences encoded by extremophilic and extremotolerant bacteria

Identification and functional characterization of methyl-CpG binding domain protein from Tribolium castaneum

Molecular characterization and ornithine-urea cycle genes expression in air-breathing magur catfish (Clarias magur) during exposure to high external ammonia

milRNApredictor: Genome-free prediction of fungi milRNAs by incorporating k-mer scheme and distance-dependent pair potential

Association between microRNA binding site polymorphisms in immunoinflammatory genes and recurrence risk of ischemic stroke

Whole transcriptome sequencing reveals that non-coding RNAs are related to embryo morphogenesis and development in rabbits

Characterization of two kcnk3 genes in Nile tilapia (Oreochromis niloticus): Molecular cloning, tissue distribution, and transcriptional changes in various salinity of seawater

Genome-wide analysis of the SBP-box gene family transcription factors and their responses to abiotic stresses in tea (Camellia sinensis)

Identification and characterization of circular RNA in lactating mammary glands from two breeds of sheep with different milk production profiles using RNA-Seq

Elevation of long non-coding RNA GAS5 and knockdown of microRNA-21 up-regulate RECK expression to enhance esophageal squamous cell carcinoma cell radio-sensitivity after radiotherapy

Comparative mitochondrial genomic analysis of Macrophthalmus pacificus and insights into the phylogeny of the Ocypodoidea & Grapsoidea

Identifying suitable tools for variant detection and differential gene expression using RNA-seq data

Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates

Meta-analysis of association of FTO genetic variation with PCOS must account for obesity