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Structure of transmembrane prolyl 4-hydroxylase reveals unique organization of EF and dioxygenase domains.Wierenga, R.K.35 dayssaveRefWorks
Crystallographic binding studies of rat peroxisomal multifunctional enzyme type 1 with 3-ketodecanoyl-CoA: capturing active and inactive states of its hydratase and dehydrogenase catalytic sites.Wierenga, R.K.51 dayssaveRefWorks
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Complementary substrate specificity and distinct quaternary assembly of the Escherichia coli aerobic and anaerobic beta-oxidation trifunctional enzyme complexes.Wierenga, R.K.576 dayssaveRefWorks
The peroxisomal zebrafish SCP2-thiolase (type-1) is a weak transient dimer as revealed by crystal structures and native mass spectrometry.Wierenga, R.K.760 dayssaveRefWorks
Structural enzymology binding studies of the peptide-substrate-binding domain of human collagen prolyl 4-hydroxylase (type-II): high affinity peptides have a PxGP sequence motif.Wierenga, R.K.874 dayssaveRefWorks
Crystal structure of human anterior gradient protein 3.Wierenga, R.K.934 dayssaveRefWorks
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The EMBO biocatalysis conference "The biochemistry and chemistry of biocatalysis: from understanding to design".Wierenga, R.K.1367 dayssaveRefWorks
Assembly of the elongated collagen prolyl 4-hydroxylase α2β2 heterotetramer around a central α2 dimer.Wierenga, R.K.1466 dayssaveRefWorks
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Crystal structure of a thiolase from Escherichia coli at 1.8 Å resolution.Wierenga, R.K.1662 dayssaveRefWorks
Crystal structures of two monomeric triosephosphate isomerase variants identified via a directed-evolution protocol selecting for L-arabinose isomerase activity.Wierenga, R.K.1682 dayssaveRefWorks
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The SCP2-thiolase-like protein (SLP) of Trypanosoma brucei is an enzyme involved in lipid metabolism.Wierenga, R.K.1739 dayssaveRefWorks
The extended structure of the periplasmic region of CdsD, a structural protein of the Type III Secretion System of Chlamydia trachomatis.Wierenga, R.K.1793 dayssaveRefWorks
Structural characterization of a mitochondrial 3-ketoacyl-CoA (T1)-like thiolase from Mycobacterium smegmatis.Wierenga, R.K.1878 dayssaveRefWorks
Structures of yeast peroxisomalΔ(3),Δ(2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.Wierenga, R.K.1907 dayssaveRefWorks
ATGme: Open-source web application for rare codon identification and custom DNA sequence optimization.Wierenga, R.K.1948 dayssaveRefWorks
Structure-based directed evolution of a monomeric triosephosphate isomerase: toward a pentose sugar isomerase.Wierenga, R.K.2141 dayssaveRefWorks
HumanΔ(3) , Δ(2) -enoyl-CoA isomerase, type-2: a structural enzymology study on the catalytic role of its ACBP-domain and helix-10.Wierenga, R.K.2228 dayssaveRefWorks
The crystal structure of human mitochondrial 3-ketoacyl-CoA thiolase (T1): insight into the reaction mechanism of its thiolase and thioesterase activities.Wierenga, R.K.2240 dayssaveRefWorks
Crystallization and preliminary X-ray diffraction studies of the C-terminal domain of Chlamydia trachomatis CdsD.Wierenga, R.K.2299 dayssaveRefWorks
Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase.Wierenga, R.K.2327 dayssaveRefWorks
Phylogenetic relationships and classification of thiolases and thiolase-like proteins of Mycobacterium tuberculosis and Mycobacterium smegmatis.Wierenga, R.K.2444 dayssaveRefWorks
A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization.Wierenga, R.K.2488 dayssaveRefWorks
The Structural Motifs for Substrate Binding and Dimerization of theα Subunit of Collagen Prolyl 4-Hydroxylase.Wierenga, R.K.2629 dayssaveRefWorks
Development of MLPA for human ACAT1 gene and identification of a heterozygous Alu-mediated deletion of exons 3 and 4 in a patient with mitochondrial acetoacetyl-CoA thiolase (T2) deficiency.Wierenga, R.K.2725 dayssaveRefWorks
Structural Mutations that Probe the Interactions between the Catalytic and Dianion Activation Sites at Triosephosphate Isomerase.Wierenga, R.K.2727 dayssaveRefWorks
Crystal structures of SCP2-thiolases of Trypanosomatidae, human pathogens causing widespread tropical diseases: the importance for catalysis of the cysteine of the unique HDCF loop.Wierenga, R.K.2727 dayssaveRefWorks
Structure of mycobacterialβ-oxidation trifunctional enzyme reveals its altered assembly and putative substrate channeling pathway.Wierenga, R.K.2867 dayssaveRefWorks
Three Japanese Patients with Beta-Ketothiolase Deficiency Who Share a Mutation, c.431A>C (H144P) in ACAT1 : Subtle Abnormality in Urinary Organic Acid Analysis and Blood Acylcarnitine Analysis Using Tandem Mass Spectrometry.Wierenga, R.K.2891 dayssaveRefWorks
The isomerase and hydratase reaction mechanism of the crotonase active site of the multifunctional enzyme (type-1), as deduced from structures of complexes with 3S-hydroxy-acyl-CoA.Wierenga, R.K.2916 dayssaveRefWorks
Crystal Structure of a Monomeric Thiolase-Like Protein Type 1 (TLP1) from Mycobacterium smegmatis.Wierenga, R.K.3098 dayssaveRefWorks
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The characterization and evolutionary relationships of a trypanosomal thiolase.Wierenga, R.K.3420 dayssaveRefWorks
Cloning, expression, purification and preliminary X-ray diffraction studies of a putative Mycobacterium smegmatis thiolase.Wierenga, R.K.3466 dayssaveRefWorks
High resolution crystal structures of triosephosphate isomerase (TIM) complexed with its suicide inhibitors: The conformational flexibility of the catalytic glutamate in its closed, liganded active site.Wierenga, R.K.3519 dayssaveRefWorks
Stereoelectronic Requirements for Optimal Hydrogen-Bond-Catalyzed Enolization.Wierenga, R.K.3634 dayssaveRefWorks
Triosephosphate isomerase: a highly evolved biocatalyst.Wierenga, R.K.3819 dayssaveRefWorks
Crystallographic binding studies with an engineered monomeric variant of triosephosphate isomerase.Wierenga, R.K.3819 dayssaveRefWorks
The crystal structure of liganded rat peroxisomal multifunctional enzyme type 1: a flexible molecule with two interconnected active sites.Wierenga, R.K.3907 dayssaveRefWorks
Atomic resolution crystallography of a complex of triosephosphate isomerase with a reaction-intermediate analog: New insight in the proton transfer reaction mechanism.Wierenga, R.K.3964 dayssaveRefWorks
The thiolase reaction mechanism: the importance of Asn316 and His348 for stabilizing the enolate intermediate of the Claisen condensation.Wierenga, R.K.4111 dayssaveRefWorks
Mitochondrial fatty acid synthesis - an adopted set of enzymes making a pathway of major importance for the cellular metabolism.Wierenga, R.K.4175 dayssaveRefWorks
17{beta}-Hydroxysteroid dehydrogenase type 8 and carbonyl reductase type 4 assemble as a ketoacyl reductase of human mitochondrial FAS.Wierenga, R.K.4222 dayssaveRefWorks
The crystal structure of an algal prolyl 4-hydroxylase complexed with a proline-rich peptide reveals a novel buried tripeptide binding motif.Wierenga, R.K.4229 dayssaveRefWorks
Inclusion of ionization states of ligands in affinity calculations.Wierenga, R.K.4419 dayssaveRefWorks
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