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Insights into the stability and substrate specificity of the E. coli aerobicβ-oxidation trifunctional enzyme complex.Wierenga, R.K.259 dayssaveRefWorks
Mutation update on ACAT1 variants associated with mitochondrial acetoacetyl-CoA thiolase (T2) deficiency.Wierenga, R.K.516 dayssaveRefWorks
Complementary substrate specificity and distinct quaternary assembly of the Escherichia coli aerobic and anaerobic beta-oxidation trifunctional enzyme complexes.Wierenga, R.K.523 dayssaveRefWorks
The peroxisomal zebrafish SCP2-thiolase (type-1) is a weak transient dimer as revealed by crystal structures and native mass spectrometry.Wierenga, R.K.707 dayssaveRefWorks
Structural enzymology binding studies of the peptide-substrate-binding domain of human collagen prolyl 4-hydroxylase (type-II): high affinity peptides have a PxGP sequence motif.Wierenga, R.K.821 dayssaveRefWorks
Crystal structure of human anterior gradient protein 3.Wierenga, R.K.881 dayssaveRefWorks
De novo biosynthesis of sterols and fatty acids in the Trypanosoma brucei procyclic form: Carbon source preferences and metabolic flux redistributions.Wierenga, R.K.915 dayssaveRefWorks
Structural enzymology comparisons of multifunctional enzyme, type-1 (MFE1): the flexibility of its dehydrogenase part.Wierenga, R.K.1084 dayssaveRefWorks
The EMBO biocatalysis conference "The biochemistry and chemistry of biocatalysis: from understanding to design".Wierenga, R.K.1314 dayssaveRefWorks
Assembly of the elongated collagen prolyl 4-hydroxylase α2β2 heterotetramer around a central α2 dimer.Wierenga, R.K.1413 dayssaveRefWorks
Crystallographic substrate binding studies of Leishmania mexicana SCP2-thiolase (type-2): unique features of oxyanion hole-1.Wierenga, R.K.1422 dayssaveRefWorks
Crystal structure of a thiolase from Escherichia coli at 1.8 Å resolution.Wierenga, R.K.1609 dayssaveRefWorks
Crystal structures of two monomeric triosephosphate isomerase variants identified via a directed-evolution protocol selecting for L-arabinose isomerase activity.Wierenga, R.K.1629 dayssaveRefWorks
Structure-Function Studies on Hydrophobic Residues that Clamp a Basic Glutamate Side-Chain During Catalysis by Triosephosphate Isomerase.Wierenga, R.K.1670 dayssaveRefWorks
The SCP2-thiolase-like protein (SLP) of Trypanosoma brucei is an enzyme involved in lipid metabolism.Wierenga, R.K.1685 dayssaveRefWorks
The extended structure of the periplasmic region of CdsD, a structural protein of the Type III Secretion System of Chlamydia trachomatis.Wierenga, R.K.1740 dayssaveRefWorks
Structural characterization of a mitochondrial 3-ketoacyl-CoA (T1)-like thiolase from Mycobacterium smegmatis.Wierenga, R.K.1824 dayssaveRefWorks
Structures of yeast peroxisomalΔ(3),Δ(2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.Wierenga, R.K.1854 dayssaveRefWorks
ATGme: Open-source web application for rare codon identification and custom DNA sequence optimization.Wierenga, R.K.1895 dayssaveRefWorks
Structure-based directed evolution of a monomeric triosephosphate isomerase: toward a pentose sugar isomerase.Wierenga, R.K.2088 dayssaveRefWorks
HumanΔ(3) , Δ(2) -enoyl-CoA isomerase, type-2: a structural enzymology study on the catalytic role of its ACBP-domain and helix-10.Wierenga, R.K.2175 dayssaveRefWorks
The crystal structure of human mitochondrial 3-ketoacyl-CoA thiolase (T1): insight into the reaction mechanism of its thiolase and thioesterase activities.Wierenga, R.K.2187 dayssaveRefWorks
Crystallization and preliminary X-ray diffraction studies of the C-terminal domain of Chlamydia trachomatis CdsD.Wierenga, R.K.2246 dayssaveRefWorks
Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase.Wierenga, R.K.2274 dayssaveRefWorks
Phylogenetic relationships and classification of thiolases and thiolase-like proteins of Mycobacterium tuberculosis and Mycobacterium smegmatis.Wierenga, R.K.2391 dayssaveRefWorks
A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization.Wierenga, R.K.2435 dayssaveRefWorks
The Structural Motifs for Substrate Binding and Dimerization of theα Subunit of Collagen Prolyl 4-Hydroxylase.Wierenga, R.K.2576 dayssaveRefWorks
Development of MLPA for human ACAT1 gene and identification of a heterozygous Alu-mediated deletion of exons 3 and 4 in a patient with mitochondrial acetoacetyl-CoA thiolase (T2) deficiency.Wierenga, R.K.2672 dayssaveRefWorks
Structural Mutations that Probe the Interactions between the Catalytic and Dianion Activation Sites at Triosephosphate Isomerase.Wierenga, R.K.2674 dayssaveRefWorks
Crystal structures of SCP2-thiolases of Trypanosomatidae, human pathogens causing widespread tropical diseases: the importance for catalysis of the cysteine of the unique HDCF loop.Wierenga, R.K.2674 dayssaveRefWorks
Structure of mycobacterialβ-oxidation trifunctional enzyme reveals its altered assembly and putative substrate channeling pathway.Wierenga, R.K.2814 dayssaveRefWorks
Three Japanese Patients with Beta-Ketothiolase Deficiency Who Share a Mutation, c.431A>C (H144P) in ACAT1 : Subtle Abnormality in Urinary Organic Acid Analysis and Blood Acylcarnitine Analysis Using Tandem Mass Spectrometry.Wierenga, R.K.2838 dayssaveRefWorks
The isomerase and hydratase reaction mechanism of the crotonase active site of the multifunctional enzyme (type-1), as deduced from structures of complexes with 3S-hydroxy-acyl-CoA.Wierenga, R.K.2863 dayssaveRefWorks
Crystal Structure of a Monomeric Thiolase-Like Protein Type 1 (TLP1) from Mycobacterium smegmatis.Wierenga, R.K.3045 dayssaveRefWorks
The Enolization Chemistry of a Thioester Dependent Racemase: The 1.4Å Crystal Structure of a Reaction Intermediate Complex Characterized by Detailed QM/MM-Calculations.Wierenga, R.K.3197 dayssaveRefWorks
The characterization and evolutionary relationships of a trypanosomal thiolase.Wierenga, R.K.3367 dayssaveRefWorks
Cloning, expression, purification and preliminary X-ray diffraction studies of a putative Mycobacterium smegmatis thiolase.Wierenga, R.K.3413 dayssaveRefWorks
High resolution crystal structures of triosephosphate isomerase (TIM) complexed with its suicide inhibitors: The conformational flexibility of the catalytic glutamate in its closed, liganded active site.Wierenga, R.K.3466 dayssaveRefWorks
Stereoelectronic Requirements for Optimal Hydrogen-Bond-Catalyzed Enolization.Wierenga, R.K.3581 dayssaveRefWorks
Triosephosphate isomerase: a highly evolved biocatalyst.Wierenga, R.K.3766 dayssaveRefWorks
Crystallographic binding studies with an engineered monomeric variant of triosephosphate isomerase.Wierenga, R.K.3766 dayssaveRefWorks
The crystal structure of liganded rat peroxisomal multifunctional enzyme type 1: a flexible molecule with two interconnected active sites.Wierenga, R.K.3854 dayssaveRefWorks
Atomic resolution crystallography of a complex of triosephosphate isomerase with a reaction-intermediate analog: New insight in the proton transfer reaction mechanism.Wierenga, R.K.3911 dayssaveRefWorks
The thiolase reaction mechanism: the importance of Asn316 and His348 for stabilizing the enolate intermediate of the Claisen condensation.Wierenga, R.K.4058 dayssaveRefWorks
Mitochondrial fatty acid synthesis - an adopted set of enzymes making a pathway of major importance for the cellular metabolism.Wierenga, R.K.4122 dayssaveRefWorks
17{beta}-Hydroxysteroid dehydrogenase type 8 and carbonyl reductase type 4 assemble as a ketoacyl reductase of human mitochondrial FAS.Wierenga, R.K.4169 dayssaveRefWorks
The crystal structure of an algal prolyl 4-hydroxylase complexed with a proline-rich peptide reveals a novel buried tripeptide binding motif.Wierenga, R.K.4176 dayssaveRefWorks
Inclusion of ionization states of ligands in affinity calculations.Wierenga, R.K.4366 dayssaveRefWorks
The sulfur atoms of the substrate CoA and the catalytic cysteine are required for a productive mode of substrate binding in bacterial biosynthetic thiolase, a thioester-dependent enzyme.Wierenga, R.K.4394 dayssaveRefWorks
Alternative Conformations of the x Region of Human Protein Disulphide-Isomerase Modulate Exposure of the Substrate Binding b' Domain.Wierenga, R.K.4455 dayssaveRefWorks
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